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1

Cooperation between Complexes that Regulate Chromatin Structure and Transcription

Geeta J. Narlikar, Hua-Ying Fan, Robert E. Kingston

Journal:

Year:

2002

Language:

english

File:

PDF, 394 KB

english, 2002

2

Mechanisms and Functions of ATP-Dependent Chromatin-Remodeling Enzymes

Narlikar, Geeta J., Sundaramoorthy, Ramasubramanian, Owen-Hughes, Tom

Journal:

Year:

2013

Language:

english

File:

PDF, 1.61 MB

english, 2013

3

MECHANISTIC ASPECTS OF ENZYMATIC CATALYSIS:Lessons from Comparison of RNA and Protein Enzymes 0

Narlikar, Geeta J., Herschlag, Daniel

Journal:

Annual Review of Biochemistry

Year:

1997

Language:

english

File:

PDF, 360 KB

english, 1997

4

Mechanisms of ATP-Dependent Chromatin Remodeling Motors

Zhou, Coral Y., Johnson, Stephanie L., Gamarra, Nathan I., Narlikar, Geeta J.

Journal:

Annual Review of Biophysics

Year:

2016

Language:

english

File:

PDF, 2.55 MB

english, 2016

5

Topical collection on Chromatin Biology and Epigenetics

Narlikar, Geeta, Galande, Sanjeev

Journal:

Journal of Biosciences

Year:

2020

File:

PDF, 151 KB

2020

6

A proposal for kinetic proof reading by ISWI family chromatin remodeling motors

Geeta J Narlikar

Journal:

Current Opinion in Chemical Biology

Year:

2010

Language:

english

File:

PDF, 265 KB

english, 2010

7

The chromatin remodeller ACF acts as a dimeric motor to space nucleosomes

Racki, Lisa R., Yang, Janet G., Naber, Nariman, Partensky, Peretz D., Acevedo, Ashley, Purcell, Thomas J., Cooke, Roger, Cheng, Yifan, Narlikar, Geeta J.

Journal:

Year:

2009

Language:

english

File:

PDF, 672 KB

english, 2009

8

Dynamics of nucleosome remodelling by individual ACF complexes

Blosser, Timothy R., Yang, Janet G., Stone, Michael D., Narlikar, Geeta J., Zhuang, Xiaowei

Journal:

Year:

2009

Language:

english

File:

PDF, 493 KB

english, 2009

9

Isolation of a local tertiary folding transition in the context of a globally folded RNA

Narlikar, Geeta J., Herschlag, Daniel

Journal:

Natural Structural Biology

Year:

1996

File:

PDF, 1.02 MB

1996

10

The chromatin-remodeling enzyme ACF is an ATP-dependent DNA length sensor that regulates nucleosome spacing

Yang, Janet G, Madrid, Tina Shahian, Sevastopoulos, Elena, Narlikar, Geeta J

Journal:

Nature Structural and Molecular Biology

Year:

2006

Language:

english

File:

PDF, 497 KB

english, 2006

11

Chromatin Remodelers Act Globally, Sequence Positions Nucleosomes Locally

Peretz D. Partensky, Geeta J. Narlikar

Journal:

Journal of Molecular Biology

Year:

2009

Language:

english

File:

PDF, 624 KB

english, 2009

12

The Site-Specific Installation of Methyl-Lysine Analogs into Recombinant Histones

Matthew D. Simon, Feixia Chu, Lisa R. Racki, Cecile C. de la Cruz, Alma L. Burlingame, Barbara Panning, Geeta J. Narlikar, Kevan M. Shokat

Journal:

Year:

2007

Language:

english

File:

PDF, 1024 KB

english, 2007

13

ATP-dependent chromatin remodeling enzymes: two heads are not better, just different

Lisa R Racki, Geeta J Narlikar

Journal:

Current Opinion in Genetics & Development

Year:

2008

Language:

english

File:

PDF, 529 KB

english, 2008

14

Chromodomain-Mediated Oligomerization of HP1 Suggests a Nucleosome-Bridging Mechanism for Heterochromatin Assembly

Daniele Canzio, Evelyn Y. Chang, Smita Shankar, Kristopher M. Kuchenbecker, Matthew D. Simon, Hiten D. Madhani, Geeta J. Narlikar, Bassem Al-Sady

Journal:

Year:

2011

Language:

english

File:

PDF, 1.82 MB

english, 2011

15

FRET-based methods to study ATP-dependent changes in chromatin structure

Janet G. Yang, Geeta J. Narlikar

Journal:

Year:

2007

Language:

english

File:

PDF, 193 KB

english, 2007

16

Reconstitution of a Core Chromatin Remodeling Complex from SWI/SNF Subunits

Michael L Phelan, Saïd Sif, Geeta J Narlikar, Robert E Kingston

Journal:

Year:

1999

Language:

english

File:

PDF, 161 KB

english, 1999

17

Generation and Interconversion of Multiple Distinct Nucleosomal States as a Mechanism for Catalyzing Chromatin Fluidity

Geeta J. Narlikar, Michael L. Phelan, Robert E. Kingston

Journal:

Year:

2001

Language:

english

File:

PDF, 470 KB

english, 2001

18

Distinct Strategies to Make Nucleosomal DNA Accessible

Hua-Ying Fan, Xi He, Robert E. Kingston, Geeta J. Narlikar

Journal:

Year:

2003

Language:

english

File:

PDF, 622 KB

english, 2003

19

EPR Spectroscopy Shows That the H4 Tail of the Nucleosome Influences the Nucleotide-Binding Pocket of Acf

Racki, Lisa, Naber, Nariman, Cooke, Roger, Narlikar, Geeta

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 37 KB

english, 2011

20

Reconstitution of Nucleosome Demethylation and Catalytic Properties of a Jumonji Histone Demethylase

Shiau, Carrie, Trnka, Michael J., Bozicevic, Alen, Torres, Idelisse Ortiz, Al-Sady, Bassem, Burlingame, Alma L., Narlikar, Geeta J., Fujimori, Danica Galonić

Journal:

Chemistry & Biology

Year:

2013

Language:

english

File:

PDF, 601 KB

english, 2013

21

Division of Labor between the Chromodomains of HP1 and Suv39 Methylase Enables Coordination of Heterochromatin Spread

Al-Sady, Bassem, Madhani, Hiten D., Narlikar, Geeta J.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.24 MB

english, 2013

22

The Histone H4 Tail Regulates the Conformation of the ATP-Binding Pocket in the SNF2h Chromatin Remodeling Enzyme

Racki, Lisa R., Naber, Nariman, Pate, Ed, Leonard, John D., Cooke, Roger, Narlikar, Geeta J.

Journal:

Journal of Molecular Biology

Year:

2014

Language:

english

File:

PDF, 609 KB

english, 2014

23

The Mechanism of Nucleosome Spacing by a Dimeric Chromatin Remodeling Enzyme

Leonard, John D., Armache, Jean-Paul, Naber, Nariman, Wu, Shenping, Pate, Edward, Cooke, Roger, Cheng, Yifan, Narlikar, Geeta J.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 57 KB

english, 2014

24

The Chromatin-Remodeling Complex ACF Functions as a Dimeric Motor to Space Nucleosomes

Racki, Lisa R., Narlikar, Geeta J., Cooke, Roger, Naber, Nariman, Purcell, Thomas J., Yang, Janet G., Cheng, Yifan, Acevedo, Ashley, Partensky, Peretz

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 37 KB

english, 2010

25

Mechanisms of functional promiscuity by HP1 proteins

Canzio, Daniele, Larson, Adam, Narlikar, Geeta J.

Journal:

Trends in Cell Biology

Year:

2014

Language:

english

File:

PDF, 1.41 MB

english, 2014

26

Nucleosome Sliding by ACF is Processive and Bidirectional

Blosser, Timothy R., Stone, Michael D., Yang, Janet, Narlikar, Geeta, Zhuang, Xiaowei

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 96 KB

english, 2009

27

Mechanisms of Chromatin Remodeling Motors

Narlikar, Geeta, Leonard, John, Racki, Lisa, Naber, Nariman, Cooke, Roger, Cheng, Yifan

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 37 KB

english, 2012

28

Table of Contents

Narlikar, Geeta, Leonard, John, Racki, Lisa, Naber, Nariman, Cooke, Roger, Cheng, Yifan

Journal:

Seminars in Nephrology

Year:

2009

Language:

english

File:

PDF, 106 KB

english, 2009

29

Mechanism of Nucleosome Remodeling by INO80 from S. Cerevisiae

Zhou, Coral Y., Narlikar, Geeta J.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 41 KB

english, 2014

30

Characterization of a Local Folding Event of the Tetrahymena Group I Ribozyme: Effects of Oligonucleotide Substrate Length, pH, and Temperature on the Two Substrate Binding Steps †

Narlikar, Geeta J., Bartley, Laura E., Khosla, Mala, Herschlag, Daniel

Journal:

Year:

1999

Language:

english

File:

PDF, 249 KB

english, 1999

31

Protonated 2‘-Aminoguanosine as a Probe of the Electrostatic Environment of the Active Site of the Tetrahymena Group I Ribozyme †

Shan, Shu-ou, Narlikar, Geeta J., Herschlag, Daniel

Journal:

Year:

1999

Language:

english

File:

PDF, 257 KB

english, 1999

32

Use of Duplex Rigidity for Stability and Specificity in RNA Tertiary Structure †

Narlikar, Geeta J., Bartley, Laura E., Herschlag, Daniel

Journal:

Year:

2000

Language:

english

File:

PDF, 152 KB

english, 2000

33

MacroH2A Allows ATP-Dependent Chromatin Remodeling by SWI/SNF and ACF Complexes but Specifically Reduces Recruitment of SWI/SNF †

Chang, Evelyn Y., Ferreira, Helder, Somers, Joanna, Nusinow, Dmitri A., Owen-Hughes, Tom, Narlikar, Geeta J.

Journal:

Year:

2008

Language:

english

File:

PDF, 2.47 MB

english, 2008

34

Quantitating Tertiary Binding Energies of 2‘ OH Groups on the P1 Duplex of the Tetrahymena Ribozyme: Intrinsic Binding Energy in an RNA Enzyme †

Narlikar, Geeta J., Khosla, Mala, Usman, Nassim, Herschlag, Daniel

Journal:

Year:

1997

Language:

english

File:

PDF, 497 KB

english, 1997

35

Dissection of the Role of the Conserved G.cntdot.U Pair in Group I RNA Self-Splicing

Knitt, Deborah S., Narlikar, Geeta J., Herschlag, Daniel

Journal:

Year:

1994

Language:

english

File:

PDF, 3.49 MB

english, 1994

36

The ATP-Dependent Remodeler RSC Transfers Histone Dimers and Octamers through the Rapid Formation of an Unstable Encounter Intermediate

Rowe, Claire E., Narlikar, Geeta J.

Journal:

Year:

2010

Language:

english

File:

PDF, 1.74 MB

english, 2010

37

Direct Demonstration of the Catalytic Role of Binding Interactions in an Enzymatic Reaction †

Narlikar, Geeta J., Herschlag, Daniel

Journal:

Year:

1998

Language:

english

File:

PDF, 140 KB

english, 1998

38

Use of Binding Energy by an RNA Enzyme for Catalysis by Positioning and Substrate Destabilization

Geeta J. Narlikar, Vidhya Gopalakrishnan, Timothy S. McConnell, Nassim Usman and Daniel Herschlag

Journal:

Proceedings of the National Academy of Sciences

Year:

1995

Language:

english

File:

PDF, 1.25 MB

english, 1995

39

A Nucleotide-Driven Switch Regulates Flanking DNA Length Sensing by a Dimeric Chromatin Remodeler

Leonard, John D., Narlikar, Geeta J.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.71 MB

english, 2015

40

Site-specific acetylation mark on an essential chromatin-remodeling complex promotes resistance to replication stress

Georgette M. Charles, Changbin Chen, Susan C. Shih, Sean R. Collins, Pedro Beltrao, Xin Zhang, Tanu Sharma, Song Tan, Alma L. Burlingame, Nevan J. Krogan, Hiten D. Madhani and Geeta J. Narlikar

Journal:

Proceedings of the National Academy of Sciences

Year:

2011

Language:

english

File:

PDF, 1.40 MB

english, 2011

41

Single-Molecule Mechanistic Dissection of a Chromatin Remodeling Motor

Johnson, Stephanie L., Gamarra, Nathan I., Johnson, Matthew J., Narlikar, Geeta J.

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 56 KB

english, 2016

42

Stable Remodeling of Tailless Nucleosomes by the Human SWI-SNF Complex

Guyon, Jeffrey R., Narlikar, Geeta J., Sif, Saïd, Kingston, Robert E.

Journal:

Molecular and Cellular Biology

Year:

1999

Language:

english

File:

PDF, 1.77 MB

english, 1999

43

Distortion of histone octamer core promotes nucleosome mobilization by a chromatin remodeler

Sinha, Kalyan K., Gross, John D., Narlikar, Geeta J.

Journal:

Year:

2017

Language:

english

File:

PDF, 2.34 MB

english, 2017

44

Regulation of Rvb1/Rvb2 by a Domain within the INO80 Chromatin Remodeling Complex Implicates the Yeast Rvbs as Protein Assembly Chaperones

Zhou, Coral Y., Stoddard, Caitlin I., Johnston, Jonathan B., Trnka, Michael J., Echeverria, Ignacia, Palovcak, Eugene, Sali, Andrej, Burlingame, Alma L., Cheng, Yifan, Narlikar, Geeta J.

Journal:

Year:

2017

Language:

english

File:

PDF, 3.18 MB

english, 2017

45

Liquid droplet formation by HP1α suggests a role for phase separation in heterochromatin

Larson, Adam G., Elnatan, Daniel, Keenen, Madeline M., Trnka, Michael J., Johnston, Jonathan B., Burlingame, Alma L., Agard, David A., Redding, Sy, Narlikar, Geeta J.

Journal:

Year:

2017

Language:

english

File:

PDF, 5.49 MB

english, 2017

46

Biochemical basis for distinct roles of the heterochromatin proteins Swi6 and Chp2

Stefan Isaac, R., Sanulli, Serena, Tibble, Ryan, Hornsby, Michael, Ravalin, Matthew, Craik, Charles S., Gross, John D., Narlikar, Geeta J.

Journal:

Journal of Molecular Biology

Year:

2017

Language:

english

File:

PDF, 702 KB

english, 2017

47

The Yeast INO80 Complex Operates as a Tunable DNA Length-Sensitive Switch to Regulate Nucleosome Sliding

Zhou, Coral Y., Johnson, Stephanie L., Lee, Laura J., Longhurst, Adam D., Beckwith, Sean L., Johnson, Matthew J., Morrison, Ashby J., Narlikar, Geeta J.

Journal:

Year:

2018

Language:

english

File:

PDF, 2.32 MB

english, 2018

48

The role of phase-separation in heterochromatin formation, function and regulation

Narlikar, Geeta J., Larson, Adam G

Journal:

Year:

2018

Language:

english

File:

PDF, 947 KB

english, 2018

49

Nucleosome breathing and remodeling constrain CRISPR-Cas9 function

Isaac, R Stefan, Jiang, Fuguo, Doudna, Jennifer A, Lim, Wendell A, Narlikar, Geeta J, Almeida, Ricardo

Journal:

Year:

2016

Language:

english

File:

PDF, 652 KB

english, 2016

50

Dissecting the Mechanism of HP1 Mediated Chromatin Compaction via Single Molecule DNA Curtains

Keenen, Madeline M., Larson, Adam G., Narlikar, Geeta J., Redding, Sy

Journal:

Biophysical Journal

Year:

2018

Language:

english

File:

PDF, 42 KB

english, 2018

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